– Supplementary Datasets – DatasetS4.1 – List of motif-associated TSSs identified in this study. DatasetS4.2 – List of Rho-independent terminators predicted in this study. DatasetS4.3 – Reconstructed M. florum gene-associated transcription units. DatasetS4.4 – List of orphan TSSs. DatasetS4.5 – RNA-seq quantification results and intracellular abundance of RNA species. DatasetS4.6 – 2D LC-MS/MS protein quantification results and corresponding intracellular abundances. DatasetS4.7 – KO numbers and functional categories assigned to M. florumprotein-coding genes. DatasetS4.8 – M. florum lipidomic profile determined by DI-MS/MS.